Main
Evelia Lorena Coss Navarrete
Postdoctoral fellowship at Laboratorio Internacional de Investigacion Sobre el Genoma Humano - UNAM | Gene regulation | Evolution | Bioinformatics | Autoimmune diseases | lncRNAs
Education
PhD, Plant Biotechnology
Centro de Investigacion y de Estudios Avanzados del IPN (Cinvestav), UGA-Langebio
Guanajuato, Mexico
2023 - 2018
- Dr. Selene Fernandez Valverde
- Identification and characterization of conserved long non-coding RNAs in Brassicaceae.
- Grade: 9.3/10. First person to graduate from the generation.
M. Sc., Plant Biotechnology
Centro de Investigacion y de Estudios Avanzados del IPN (Cinvestav), UGA-Langebio
Guanajuato, Mexico
2018 - 2016
- Dr. Raul Alvarez Venegas and Dr. Stefan de Folter
- Effect of priming activation on bean nodule development and its relationship against Pseudomonas syringae pv. phaseolicola.
- Grade: 9.4/10. Second person to graduate from the generation.
B.Sc.,Biotechnology Engineering
Universidad Politecnica de Sinaloa (UPSIN).
Sinaloa, Mexico
2016 - 2012
- Grade: 9.6/10.
Research Experience
Professional Practices 3 | Undergraduate Thesis Student
Centro de Investigacion y de Estudios Avanzados del IPN (Cinvestav), Irapuato.
Queretaro, Mexico
2015
- Dr. Raul Alvarez Venegas, Dr. Aaron Barraza Celis and Dr. Alejandra Hernandez Barrera
- Histochemical analysis of the effect of bean (Phaseolus vulgaris l.) trithorax group methyltransferases during nodulation.
Research Stay 1 (Delfin project)
Universidad Politecnica de Sinaloa (UPSIN).
Sinaloa, Mexico
2015
- Dr. Jesus Aaron Salazar Leyva
- Characterization of the proteolytic properties of the crude extract of aguama fruit (Bromelia pinguin L).
- Protease analysis by zymography.
Professional Practices 2
Centro de Investigacion y de Estudios Avanzados del IPN (Cinvestav), Irapuato.
Guanajuato, Mexico
2014
- Dr. Raul Alvarez Venegas and Dr. Aaron Barraza Celis
- Analysis of histone methyltransferases expression in different tissues of bean (Phaseolus vulgaris) plant.
Research Stay 1 (Delfin project)
Facultad de Ciencias del Mar (FACIMAR), Universidad Autonoma de Sinaloa (UAS)
Sinaloa, Mexico
2014
- M.C. Idalia Osuna Ruiz.
- Standardization of biochemical methods for microalgae.
Professional Practices 1
Centro de Investigacion en Alimentacion y Desarrollo (CIAD)
Sinaloa, Mexico
2013
- M.P.A. Noemi Garcia Aguilar and M.C. Gabriela Velasco Blanco
- Cultivation of herbs (Mentha spicata), oregano (Origanum vulgare), radish (Raphanus sativus), green forage and Tilapia (Oreochromis sp) in an aquaponic system.
Teaching Experience
CDSB 2023 - Quality control in scRNA-Seq
N/A
Virtual event
2023
- Instructor for CDSB2023
- Comunidad de Desarrolladores de Software en Bioinformatica (CDSB), Nodo Nacional de Bioinformatica
Introduction to RNA-seq data analysis with R
Estudios Superiores, Unidad Juriquilla (ENES), UNAM
Queretaro, Mexico
2023
- Main instructor: Dr. Alejandra Medina-Rivera
- Instructor for RNAseq_classFEB2023
- Bioinformatics and Statistics 2, Genomic Sciences Program
Data analysis with R
Centro de Ciencias Matematicas (CCM), UNAM
Virtual event
2023
- Instructor for Manipulacion_de_datos
- R-ladies Morelia
Helper in R Workshop and Git/Github
Centro de Ciencias Matematicas (CCM), UNAM
Virtual event
2022
- Main instructor: Dr. Abraham Avelar Rivas, M.Sc. Diego Garfias Gallegos and M.Sc. Claudia Zirion Martinez
- Helper for Software Carpentry
- Software Carpentry
Rmarkdown Introduction
Centro de Ciencias Matematicas (CCM), UNAM
Virtual event
2022
- Instructor for Rmarkdown
- R-ladies Morelia
Data analysis and graphs in R
Centro de Ciencias Matematicas (CCM), UNAM
Virtual event
2022
- Instructor for Marvel_vs_DCcomics
- R-ladies Morelia
Data Science Writing
Plants & Python: A series of lessons in coding, plant biology, computation, and bioinformatics
N/A
N/A
2022
- VanBuren R , Rougon-Cardoso A, Amezquita EJ, Coss-Navarrete EL, Espinosa-Jaime A, Gonzalez-Iturbe OA, Luckie-Duque AC, Mendoza-Galindo E, Pardo J, Rodriguez-Guerrero G, Rosiles-Loeza PY, Vasquez-Cruz M, Fernandez-Valverde SL, Hernandez-Hernandez T, Palande S, and Chitwood. DH. Plants & Python: A series of lessons in coding, plant biology, computation, and bioinformatics, (2022). The Plant Cell, Volume 34, Issue 7, July 2022, Page e1, https://doi.org/10.1093/plcell/koac187
Publications
Transcriptome-guided annotation and functional classification of long non-coding RNAs in Arabidopsis thaliana
N/A
N/A
2022
- Corona-Gomez, J.A., Coss-Navarrete, E.L., Garcia-Lopez, I.J. et al. Transcriptome-guided annotation and functional classification of long non-coding RNAs in Arabidopsis thaliana. Sci Rep 12, 14063 (2022). https://doi.org/10.1038/s41598-022-18254-0
Capter 6- Induction of plant resistance to biotic stress by priming with B-aminobutyric acid (BABA) and its effect on nitrogen-fixing nodule development
N/A
N/A
2020
- Coss-Navarrete EL, Diaz-Valle A, Alvarez-Venegas R. Chapter 6 - Induction of plant resistance to biotic stress by priming with B-aminobutyric acid (BABA) and its effect on nitrogen-fixing nodule development, Editor(s): Mohammad Anwar Hossain, Fulai Liu, David J. Burritt, Masayuki Fujita, Bingru Huang, Priming-Mediated Stress and Cross-Stress Tolerance in Crop Plants, Academic Press, 2020, Pages 101-114, ISBN 9780128178928, https://doi.org/10.1016/B978-0-12-817892-8.00006-4.
Down-regulation of PvTRX1h increases nodule number and affects auxin, starch, and metabolic fingerprints in the common bean (Phaseolus vulgaris L.)
N/A
N/A
2018
- Barraza A, Coss-Navarrete EL, Vizuet-de-Rueda JC, Martinez-Aguilar K, Hernandez-Chavez JL, Ordaz-Ortiz JJ, Winkler R, Tiessen A, Alvarez-Venegas R. Down-regulation of PvTRX1h increases nodule number and affects auxin, starch, and metabolic fingerprints in the common bean (Phaseolus vulgaris L.) (2018). Plant Science, Volume 274,Pages 45-58, ISSN 0168-9452, https://doi.org/10.1016/j.plantsci.2018.05.006
CARACTERIZACION PARCIAL DE LA ACTIVIDAD COAGULANTE Y CASEINOLITICA DE LAS PROTEASAS DEL FRUTO DE AGUAMA (Bromelia pinguin L.)
N/A
N/A
2017
- Moreno-Henandez, J. M., Hernandez-Mancillas, X. D., Coss Navarrete, E. L., Banuelos-Perez, M. de J., Salazar-Leyva, J. A., Osuna-Ruiz, I., Rodriguez-Tirado, V. A., & Mazorra-Manzano, M. Angel. (2017). CARACTERIZACION PARCIAL DE LA ACTIVIDAD COAGULANTE Y CASEINOLITICA DE LAS PROTEASAS DEL FRUTO DE AGUAMA (Bromelia pinguin L.). Biotecnia, 19(2), 19-24. https://doi.org/10.18633/biotecnia.v19i2.380
Partial Characterization of the Proteolytic Properties of an Enzymatic Extract From Aguama Bromelia pinguin L. Fruit Grown in Mexico
N/A
N/A
2016
- Moreno-Hernandez, JM, Hernandez-Mancillas, XD, Coss-Navarrete, EL, Mazorra-Manzano, MA, Osuna-Ruiz I, Rodriguez-Tirado, VA, Salazar Leyva JA. Partial Characterization of the Proteolytic Properties of an Enzymatic Extract From Aguama Bromelia pinguin L. Fruit Grown in Mexico. Appl Biochem Biotechnol 182, 181-196 (2017). https://doi.org/10.1007/s12010-016-2319-x
Talks and Posters
Sociedad Mexicana de Bioqumica (SMB) X
Poster
Yucatan, Mexico
2022
- Co-authors: M.C. Evelia Lorena Coss Navarrete, Dr. Jose Antonio Corona-Gomez, Dr. Laurence Hurst, Dr. Stewart Gillmor, Dr. Katarzyna Oktaba, and Dr. Selene L. Fernandez-Valverde
- Conservation analysis of sequence-divergent lincRNAs in Brassicaceae
FASEB 2021: The Mechanisms of Plany Development
Poster
Virtual event
2021
- Co-authors: M.C. Evelia Lorena Coss Navarrete, Dr. Jose Antonio Corona-Gomez, Dr. Laurence Hurst, Dr. Stewart Gillmor, Dr. Katarzyna Oktaba, and Dr. Selene L. Fernandez-Valverde
- Transcriptomic-informed annotation and functional classification of long non-coding RNAs in Arabidopsis thaliana
EMBL Symposium 2021: The Non-Coding Genome
Poster
Virtual event
2021
- Co-authors: M.C. Evelia Lorena Coss Navarrete, Dr. Jose Antonio Corona-Gomez, Dr. Laurence Hurst, Dr. Stewart Gillmor, Dr. Katarzyna Oktaba, and Dr. Selene L. Fernandez-Valverde
- Transcriptomic-informed annotation and functional classification of long non-coding RNAs in Arabidopsis thaliana
2nd Interinstitutional Congress of Young Researchers
Talk
Chihuahua, Mexico
2015
- Co-authors: Coss Navarrete EL, Hernandez-Mancillas, XD, Salazar Leyva, JA.
- Biochemical characterization of a crude protease extract obtained from the wild plant aguama (Bromelia pinguin) native to southern Sinaloa.
- Biotechnology and agricultural science
Delfin, Programa Interinstitucional para el fortalecimiento de la investigacion y el posgrado del pacifico
Talk
Nayarit, Mexico
2014
- Co-authors: Coss Navarrete EL, Osuna-Ruiz I
- Standardization of biochemical methods in aquatic organisms.
Courses
CDSB 2023: Creando paquetes de R/Bioconductor para analisis transcriptomico de celula unica
Instructor and helper
Virtual event
2023
- Main instructor: Dr. Joselyn Cristina Chavez Fuentes, Dr. Leonardo Collado-Torres, Dr. Alejandra Medina Rivera, Dra. Evelia Lorena Coss Navarrete, Dr. Laura Gomez Romero, Dr. Yalbi Balderas Martinez, Dr. Mirna Vazquez Rosas Landa, M.C. Jose Antonio Ovando Ricardez, M.C. Erick Cuevas Fernandez and Andres Arredondo Cruz
- CDSB2023, DE in scRNA-SEq and R/Bioconductor packages
- Comunidad de Desarrolladores de Software en Bioinform<U+00E1>tica (CDSB), Nodo Nacional de Bioinformatica
Analysis of biological and biomedical transcriptomic data using Artificial Intelligence (AI) and Machine Learning methods (ML) methods with R
UNAM
Queretaro, Mexico
2022
- Main instructor: Dr. Javier De Las Rivas (CSIC-USAL-IBSAL, Spain), Dr. Maribel Hernandez Rosales (CINVESTAV, Mexico), Dr. Enrique De Las Rosa (CSIC-USAL-IBSAL, Spain), and Dr. Flavio Spetale (CIFASIS- CONICET-UNR, Argentina).
- ISCB-LA SoIBio BioNetMX Symposium 2022
- RiaBio 2022
The art and method of writing a Scientific Manuscript
N/A
Virtual event
2022
- Main instructor: Dr. Susan Marriott
- BioScience Writers
Genetic variants search
N/A
Virtual event
2021
- Main instructor: Dr. Victor Flores
- ATGenomics
Network analysis using igraph for R: a primer
N/A
Virtual event
2021
- Main instructor: Dr. Guillermo de Anda Jauregui
- 2nd Workshop in advanced Bioinformatics
Co-expression networks
N/A
Virtual event
2021
- Main instructor: Dr. Katja Nowick
- 2nd Workshop in advanced Bioinformatics
Network medicine
N/A
Virtual event
2021
- Main instructor: Dr. Deisy Gypsi
- 2nd Workshop in advanced Bioinformatics
CABANA workshop: Introduction to R and Bioconductor for genomic analyses
Centro de Investigacion y de Estudios Avanzados del IPN (Cinvestav), UGA-Langebio
Guanajuato, Mexico
2019
- Main instructor: Dr. Cei Abreu Goodger and Dr. Benilton Carvalho
- CABANA
Theoretical and Practical HiC Workshop: Wet-Lab and Bioinformatics
Centro de Investigacion y de Estudios Avanzados del IPN (Cinvestav), UGA-Langebio
Guanajuato, Mexico
2019
- Main instructor: Dr. Selene Fernandez-Valverde, Dr. Francisco Perez. America Ramirez and Emilio Sotelo
- The Royal Society
Mantenimiento correctivo de Computadoras
Universidad de Occidente Unidad Mazatlan
Sinaloa, Mexico
2012
- Main instructor: M.C. Raymundo Magana
Science Communication
Conservacion de lincRNAs en Brassicaceaes
Talk
Virtual event
2022
- Ciclo de “Bases y Bytes: Platicas de Bioinformatica”
- Universidad Politecnica de Sinaloa (UPSIN).
PODCAST animalitos & plantitas: EP01 El cafe mas caro del mundo con Evelia Coss
Talk
Podcast
2021
- The Biologist Apprentice
Tercer mesa redonda “Trayectorias academicas”
Talk
Virtual event
2021
- El Rincon de la Ciencia
Identificacion y caracterizacion de ARNs largos no codificantes conservados en Brasicaceas
Talk
Guanajuato, Mexico
2019
- Semana Tecnologica
- Tecnologico Nacional de Mexico, Instituto Tecnologico Superior de Purisima del Rincon
Social Service
Facultad de Ciencias del Mar (FACIMAR), Universidad Autonoma de Sinaloa (UAS)
Sinaloa, Mexico
2014